Browse of TCMCG043C19075 protein

CDS

Accession Number	TCMCG043C19075
gbkey	CDS
Protein Id	XP_022860482.1
Location	join(1179715..1179841,1179922..1180008,1180153..1180240,1180316..1180399,1181255..1181332,1181458..1181537,1182707..1182785,1182977..1183291,1183832..1183891,1183983..1184241,1185129..1185383,1187830..1189203,1189957..1190227,1190322..1190454,1191350..1191437,1191608..1191686,1192527..1192822,1193190..1194291,1194849..1195220,1196070..1196671)
Gene	LOC111381001
GeneID	111381001
Organism	Olea europaea var. sylvestris

Protein

Length	1942aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA417827
db_source	XM_023004714.1
Definition	mediator of RNA polymerase II transcription subunit 13 isoform X4 [Olea europaea var. sylvestris]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAAAGATGCTATGACAATGCTGGTGCTTTCTTCACATTTGCAATTGCAAAAGGAAGGATTTCTCAGCGCATGGACAAATTCTTTTGTTGGACCCTGGGACCCATCTCAGGGCCAGCACAACCCTGATGAGAAGATAAAGCTCTGGCTATTCCTCCCTGGTCAACATTCCTCTGTTGTTGAGAAAGCTCAGCCTGCTCTATCTAGGTTAAGAGTTCTTGCATCTGGACTTTGGGTGGCACCTGGTGACTCAGAAGAAGTTGCAGTAGCCCTATCCCAAGCCCTACGGAACTGTATAGAAAGAGCTCTCAAAGGTCTTTCATATATGAGATTTGGTGATGTATTTTCAAAATACCATCCATTTACACGGAGTGAAGAGCTGTTCAGGAAGGGTCAGCCTGTGGTTGAGTTCGTTTTTGCTGTCACTGAAGAGGCAATTTTTGTGCATGCCATTGTATCTGCCAAGCATGTTCGAGCACTTTCAAGCGGTGATGTTGAAAGAATCTTGGGTCATTCTTTTAAGCGCTTCGACAATAGAACTCCAGTTATTGTCTCACCTCATGGAATGTGTGGGAAGCTTACAGGATGCTGTCCAAGCGACCTTGTGAAGCAAGTGTATCTGAGCTCTGGCAAATCTAGAGGTTCAAATGGAATTGTAGGTCTACCTTACCAAGTTTCTCCGGGTTCTGGTTATCAACTGAGGGGACAATACTGCTATGTTGAAGTTACCCTTGGCTGCTCAGACAAGACATCACAACCAAACATGCGGCATAAAAACTCACCTCAGCCTCATAATTTTGAAACCCCTGCAATGTCGAAAGTTACTCCTAAGGGGACATCAGATCAGTTTCCAGCTAGTGAAAGAATGTTTATTTATCCAGCAGAGTCTGTCCTTGTACCAGTTATGCAGACTTCTTTTGCTAGGTCATCTTTAAAGAGATTCTGGCTGCAAAACTGGGTCAGTTCACCGTTGTCTGGTTCATCCCTTTTTATGCCTTGTTTTGATTTTGGAAGTGATGGCAAGGCAGATTCAAAAGATGGATCTTCACTTGAACCAAGTGGCACTCACTCTCAGCATGGATATCGTAGCAGCAGCAACAGTAATAGCAGTAGTATTTGCAGCGTAAGTAGCTCCTCCACTGACAGTGATAACAAGGTCTCAGGAGCTGGTGATCTCGAGGCAGATGCCGATTCCTTAATGTGTAGACAGTCTGGATTGTCTTCCATCGACCAATCGCTGAATGATGGCCTCAAATTGGGTTCTAAGCGCCCACGAGCAGGGACATCACAGTCATTTGGTCATGCTGGTATGATTATAAATCCTCCTGCTAGTGATTATGGTTCCATAGAAGTCAACAATTCATCCATTGCTGGAGTTGCAAACGAGGAAGTTGGATCTCGTTGGGGTTGGGATGACGACGACAAAGGCATGTGCATGGATATTCAAGCGCTGCTCACAGAGTTTGGTGATTTTGGTGACTTCTTTGAGAATGATGCATTGCCTTTTGGAGAGCCTCCAGGAACTGCAGAGTCTCAAGCTCTCAAGTTTTCTGCACCTGAGTGTGACATAGGTAGCAGTCCCGGACCCTCGATGATGGATGTGTCTGATCAGATGCTTCTGCATGTAGATTTTCCATCCTTTGATAACTTTACACCCCTACCACCTCCTGCTGCCATGGAAGATTCAGCAAGCAAAAATCAAGAAGCTTCAAAAAACGCTTCAGCCTCTGCTCCTATGAACTACACTCCACCATCTTCTGGTGGTGAGTTTGATCATCTAATAAAATCTGAAGCGCTAATGACATTTGCACCTGAATATGGGGCAGTTGAAACCCCTAGAGCTGAGATCTCCTCATCGATTTTCAGAAGTCCATACATTCCAAAATATTGCAAAGTGGATACTGCTTCAAGTTCAAACAACTATGTATACTCTGCAACACCACCTTCTTCTCCCTGCTTTGATGGGTTTGAGGAAAAGTCTCTGTTGGCTGTAAAAAAGAAAGCATGCACAGAAAGGCATGACACAAGTGCTCTTCTCAAATTAAAGAATCATTACACTCTTGTTGAAAGAGGAAAAGAGCCAAATGGTGGAAGGTTGCTTGGCCGTAACAAAAGCATTGCCAAAGGCGAGACAGGAGTTGCATCATCTCAATTTTCTGTTTTGCATCCAACTGATGTTGTCAAATCTGTTTCCGATAAAGTGAAGGAAGGTCCCTCCAGAGAAGATAATTTTCGTCCATCTTCCAAAACTGTCCTTGCAACAGAAATTGAATGCCTTGCTTGTCAGTCTTCTATGTGCAGGCTACGGCACACACTATTATCTTCTAGCAACACTTTGACTAATGGTTTTAGTGGGTCTTCTGGAGCTAGCATTCTGAATCAGCCGTATGCTGATCCAAGCATCATGATGGACAATATTTCGAGCAAGTCTGAGGTGAAAAAGAAAGAAATGATACCCGTTAGGATAGCTGGTGATTTAGATAGAGATATGCCAGATGGCCCCTTGAATGCCCCTCTTGGTGTCTGGCGTTCTGTTGGAGTTTCTAAAGCTACAAAAACAAATGCCCAGAGCATGGAAATTGGACCATCTTTACCTCACAATTCATTTATTGAAGAAAGCATGCTTTCTTATGGAGTAAGGCAACCGCTTCAGGAACTTCTTGATGGCATTGCATTACTTGTTCAGCAAGCTACTTCATTTGTTGATGTGGCTTTGGATGCTGACTGTGGCGATGGTCCTTATGGTTGGCTTGTATTGCAAGAGCAGTGGAGGCGCGGATTTTCCTGTGGACCCTCTATGGTCCATGCTGGATGTGGAGGTATTTTGGCTTCTTGCCATTCGCTGGATATTGCTGGGATGGAGCTTGTTGATCCACTCTCAATTGATGTTCAGGCATCATTAACCATGACTTTGCTTCAGTCAGACATCAAAACAGCTCTAAAAACTGCATTTAGCAGCATAGATGGTCCTCTACTTGTTACTGATTGGTGCAGAGGCCGCAGTCAATCCGGTGATGGAATAATGGGCGATGGATTTTCTGCAGAATCAACTGCAAGTGCTAGCGAATGTCGAGATTCTTCTAGTACTGTAACACTATCGGTTGGAGAGTCCATGAGCCCATCTCTGTCCTCAGCTGATGGATTATCTTGCCTAAAAGATGGAACCAGAGGGGACGAGGTAAGTGAAAGGCGGCTGAACCAGGACCCTTGTGCATCAGAGTCAGATCAGCAACCAGGCTCACGGCTGCGGCCCACAATTTCTGTAGTTCCTTTTCCTTCCATACTTGTTGGGTATCAAGATGATTGGCTCAAGACCTCGCCCAGCTCTCTACAACTCTGGGAAAAGGCTCCTTTTGAACCATACGCGACTCCGAAACATATGACTTACTGTGTTGTCTGTCCAAATATTGATCCACTCACAACTGCTGCTGCTGATTTTTTCCAGCAACTCGGGACTGTTTATGAGACATGCAAGCTGGGAACACATTCACCACAAAGCCTTGGAAATGAGATGGAGTTAGATTCTGGGAAGATTTCTCCTTCAGGTTTTGTGCTGCTAGATAGTCCTCAATCCATGAAGATAGATAGCAGCAATGCATCTATGTTGGGATCTATCAGTGATTACTTTCTCTGCTTATCCAATGGCTGGGATATGACTAGCTTTTTGAAGACTCTTTCAAAGGTTCTCAAAACTTTGAAACTTGGTTCGTGCATGACTACTAATGCGAAGGAAGGAAATACTGGCCCATGCACTGTGATCTATGTGGTGTGTCCCTTCCCAGAGCCTCTTGCTGTTCTACAGACAGTTGTTGAATCTTCCATTGCTGTTGGATCAGTCCTTAGATCTTCCGATAAAGAGCGAAGATCTGTGGTGCACAATCAAGTTGCGAAGGCCTTAAGTTACTCAGCAGCTGTGGACGAATCATTTTCAAATGTTCTAACCCTAACAGGGTTTAGCGTGCCTAAGTTGGTATTGCAGGTTGTGACAGTTGATGCCATTTTCAGGGTCACAAGTCCCAGTCTTTCTGAGCTTGTCACTCTGAAGGAAATTGCTTTCACTGTTTACAATAAAGCTAGGCGAATTTCACGATCAGCCTCTGGTGACACAATTCCATCATCCACATCAGGGAGATCTCATTCTGTCTTGATGCAAATGACTTCACCTGTTCCAGGAATGTGGAAAGACTATGTTGGTCCTCGAAATGTGGGACCTCCTCACCGAAGAGGGAGTGAACTTGATGCTACCTTGAGGCCAGGTACTTGGGATAACTCTTGGCAAACATCAAGAGGTGGTGGAGTTGGATGTGACCCAAGCAGAACTGCAGATGTATATCCTCAAGATGAGATCCGTTGTTTGTTTGAGCCTCTTTTTATACTTGCTGAACCTGGATCCTTAGAGCACGGACTTTCACCTTTCTTTGGTAATGTAGCTTCTGAGTCTTCAAAGCTTTTATCTGATGATTGTGGAAGTACTAGCTTTATGCATAGTTCAGCTTCTTCAGGATGTGGAGATGCTGGTCCTAATGCACAACCTGATGCACTGGATCCAGATGCATTTGGATCTGGCCATCAAAAGACACTCCCAAGCCTGCATTGCTGCTATGGATGGACTGAGGATTGGCGTTGGTTGGTGTGCATTTGGACGGATTCGAGGGGCGAATTGCTTGACAGCTATGTGTACCCCTTCGGAGGAGTCAGCAGTCGGCAAGACACAAAGGGTCTTCAGTCCCTTCTTATCCAAATCCTGCAACAGGGCTGTCAAATACTTCAGGCTTGTTCTCCAGATGGTGGTATTGCAAAGCCTAGAGATTTTGTAATAACAAGAATTGGATGCTTCTTCGAGCTTGAGTGCCAGGAGTGGCAAAAAGCTCTGTACGCAATTGGGGGATCCGAGGTGAAAAAGTGGTCTCTGCAGCTACGACGATCCCTTCCTGATAATGGGATGCCAGCTAGTAGCAATGGAACCCCGTTGCAGCAGCAAGATGTAAGCTTAATGCAAGAGAGAACACTTCCCTCCTCAGAAAGTCCATTGTATGGTGCTCACTCAAAGGCATCTGTTTTTGGGAAAGGTGGTATGGGACAACCCTCCTCGAGAAAGCAGTTAGTGGGTGGACATCCAGCGGTGGACAATTCAAGGGGCTTGCTGCAATGGGTGCAAAGCATTAGTTTCGTCTCAGTTTCAATTGATCATTCCTTGCAGCCAATGTTTCATGCAGATTCATCTTCTGGGGCAATTCAAGGCAGTGGTCCGCCTGGCTATCTTGAAGGTTACACTCCTGTTAAATCCCTTGGTACGACCTCTGCATCCTACATCTTAATCCCTTCAAGGAGCATGCGTTTTCTCCCTCCCGCAATTCTTCAGCTCCCTACATGTCTCACTGCCGAATCCCCACCACTTGCCCATCTTCTACACAGCAAAGGTTCTGCAGTTCCCCTGTCCACAGGGTTTGTAGTTTCAAAGGCTGTACCATCGATGAGAAAGGATTCTAGGAACCCGTCAAAAGAAGAATGGCCTTCAGCTCTTTCTGTCACTTTAGTCGATTATTATGGAGGTAATAACATCACCCAAGAAAAAGTGGGGAAGGGTTCTGTCAAACCGTCAGGAAGGGGTTCGAGCTCTGATGCCAAAGAGTTCGAGGTAGAGACTCGTCTAATTCTTGAATCTATAGCAGCAGAACTTCACGCGTTATCATGGATGACTGTAAGTCCAGCTTACTTGGAAAGAAGATCAGCTTTGCCTTTCCATTGTGATATGGTTTTACGACTGAGAAGGCTTCTACATTTCGCTGATAAAGAACTATCTCGGCTTCCAGAGAAGGCACAACCGTAA

Protein:   MKDAMTMLVLSSHLQLQKEGFLSAWTNSFVGPWDPSQGQHNPDEKIKLWLFLPGQHSSVVEKAQPALSRLRVLASGLWVAPGDSEEVAVALSQALRNCIERALKGLSYMRFGDVFSKYHPFTRSEELFRKGQPVVEFVFAVTEEAIFVHAIVSAKHVRALSSGDVERILGHSFKRFDNRTPVIVSPHGMCGKLTGCCPSDLVKQVYLSSGKSRGSNGIVGLPYQVSPGSGYQLRGQYCYVEVTLGCSDKTSQPNMRHKNSPQPHNFETPAMSKVTPKGTSDQFPASERMFIYPAESVLVPVMQTSFARSSLKRFWLQNWVSSPLSGSSLFMPCFDFGSDGKADSKDGSSLEPSGTHSQHGYRSSSNSNSSSICSVSSSSTDSDNKVSGAGDLEADADSLMCRQSGLSSIDQSLNDGLKLGSKRPRAGTSQSFGHAGMIINPPASDYGSIEVNNSSIAGVANEEVGSRWGWDDDDKGMCMDIQALLTEFGDFGDFFENDALPFGEPPGTAESQALKFSAPECDIGSSPGPSMMDVSDQMLLHVDFPSFDNFTPLPPPAAMEDSASKNQEASKNASASAPMNYTPPSSGGEFDHLIKSEALMTFAPEYGAVETPRAEISSSIFRSPYIPKYCKVDTASSSNNYVYSATPPSSPCFDGFEEKSLLAVKKKACTERHDTSALLKLKNHYTLVERGKEPNGGRLLGRNKSIAKGETGVASSQFSVLHPTDVVKSVSDKVKEGPSREDNFRPSSKTVLATEIECLACQSSMCRLRHTLLSSSNTLTNGFSGSSGASILNQPYADPSIMMDNISSKSEVKKKEMIPVRIAGDLDRDMPDGPLNAPLGVWRSVGVSKATKTNAQSMEIGPSLPHNSFIEESMLSYGVRQPLQELLDGIALLVQQATSFVDVALDADCGDGPYGWLVLQEQWRRGFSCGPSMVHAGCGGILASCHSLDIAGMELVDPLSIDVQASLTMTLLQSDIKTALKTAFSSIDGPLLVTDWCRGRSQSGDGIMGDGFSAESTASASECRDSSSTVTLSVGESMSPSLSSADGLSCLKDGTRGDEVSERRLNQDPCASESDQQPGSRLRPTISVVPFPSILVGYQDDWLKTSPSSLQLWEKAPFEPYATPKHMTYCVVCPNIDPLTTAAADFFQQLGTVYETCKLGTHSPQSLGNEMELDSGKISPSGFVLLDSPQSMKIDSSNASMLGSISDYFLCLSNGWDMTSFLKTLSKVLKTLKLGSCMTTNAKEGNTGPCTVIYVVCPFPEPLAVLQTVVESSIAVGSVLRSSDKERRSVVHNQVAKALSYSAAVDESFSNVLTLTGFSVPKLVLQVVTVDAIFRVTSPSLSELVTLKEIAFTVYNKARRISRSASGDTIPSSTSGRSHSVLMQMTSPVPGMWKDYVGPRNVGPPHRRGSELDATLRPGTWDNSWQTSRGGGVGCDPSRTADVYPQDEIRCLFEPLFILAEPGSLEHGLSPFFGNVASESSKLLSDDCGSTSFMHSSASSGCGDAGPNAQPDALDPDAFGSGHQKTLPSLHCCYGWTEDWRWLVCIWTDSRGELLDSYVYPFGGVSSRQDTKGLQSLLIQILQQGCQILQACSPDGGIAKPRDFVITRIGCFFELECQEWQKALYAIGGSEVKKWSLQLRRSLPDNGMPASSNGTPLQQQDVSLMQERTLPSSESPLYGAHSKASVFGKGGMGQPSSRKQLVGGHPAVDNSRGLLQWVQSISFVSVSIDHSLQPMFHADSSSGAIQGSGPPGYLEGYTPVKSLGTTSASYILIPSRSMRFLPPAILQLPTCLTAESPPLAHLLHSKGSAVPLSTGFVVSKAVPSMRKDSRNPSKEEWPSALSVTLVDYYGGNNITQEKVGKGSVKPSGRGSSSDAKEFEVETRLILESIAAELHALSWMTVSPAYLERRSALPFHCDMVLRLRRLLHFADKELSRLPEKAQP